{"_id":"5b0e13ffc4664e0003c75bd6","user":"554340dfb7f4540d00fcef1d","parentDoc":null,"project":"5b0e13ffc4664e0003c75a66","version":{"_id":"5b0e13ffc4664e0003c75a67","project":"5b0e13ffc4664e0003c75a66","__v":4,"createdAt":"2015-09-17T16:58:03.490Z","releaseDate":"2015-09-17T16:58:03.490Z","categories":["5b0e13ffc4664e0003c75a68","5b0e13ffc4664e0003c75a69","5b0e13ffc4664e0003c75a6a","5b0e13ffc4664e0003c75a6b","5b0e13ffc4664e0003c75a6c","5b0e13ffc4664e0003c75a6d","5b0e13ffc4664e0003c75a6e","5b0e13ffc4664e0003c75a6f","5b0e13ffc4664e0003c75a70","5b0e13ffc4664e0003c75a71","5b0e13ffc4664e0003c75a72","5b0e13ffc4664e0003c75a73","5b0e13ffc4664e0003c75a74","5b0e13ffc4664e0003c75a75","5b0e13ffc4664e0003c75a76","5b0e13ffc4664e0003c75a77","5b0e13ffc4664e0003c75a89","5b0e13ffc4664e0003c75a8a","5b0e13ffc4664e0003c75a9d","5b0e13ffc4664e0003c75a9e","5b0e13ffc4664e0003c75a9f","5b0e13ffc4664e0003c75aa0","5b0e13ffc4664e0003c75aa1","5b0e13ffc4664e0003c75aa2","5b0e13ffc4664e0003c75aa3","5b0e13ffc4664e0003c75aa4","5b0e13ffc4664e0003c75aa5","5b0e13ffc4664e0003c75aa6","5b0e13ffc4664e0003c75aa7","5b0e13ffc4664e0003c75aa8","5b0e13ffc4664e0003c75aa9","5b0e13ffc4664e0003c75aaa","5b0e13ffc4664e0003c75aab","5b0e13ffc4664e0003c75aac","5b0e13ffc4664e0003c75aad","5b0e13ffc4664e0003c75aae","5b0e13ffc4664e0003c75aaf","5b0e13ffc4664e0003c75ab2","5bb3374f4306ad0003eb18e7","5bbf3c5373e72a000318362b","5bc065567d1cb0000384c649","5cbf19a5f9181f0033fbb968"],"is_deprecated":false,"is_hidden":false,"is_beta":true,"is_stable":true,"codename":"","version_clean":"1.0.0","version":"1.0"},"category":{"_id":"5b0e13ffc4664e0003c75a75","project":"5b0e13ffc4664e0003c75a66","version":"5b0e13ffc4664e0003c75a67","__v":0,"sync":{"url":"","isSync":false},"reference":true,"createdAt":"2015-09-17T17:34:34.937Z","from_sync":false,"order":32,"slug":"api","title":"API Reference"},"__v":0,"githubsync":"","metadata":{"title":"","description":"","image":[]},"updates":["56a7331203f28c0d00a54545"],"next":{"pages":[],"description":""},"createdAt":"2015-12-15T19:10:52.922Z","link_external":false,"link_url":"","sync_unique":"","hidden":false,"api":{"examples":{"codes":[]},"method":"get","results":{"codes":[]},"settings":"","auth":"required","params":[],"url":""},"isReference":true,"order":70,"body":"This call returns just the inputs provided to the specified task. The task is referred to by its ID, which you can obtain by making the call to [list all tasks you can access](doc:list-tasks-you-can-access).\n[block:code]\n{\n  \"codes\": [\n    {\n      \"code\": \"https://f4c-api.sbgenomics.com/v2/tasks/{task_id}/inputs\",\n      \"language\": \"text\",\n      \"name\": \"Path\"\n    }\n  ]\n}\n[/block]\n##Request\n\n###Example request\n[block:code]\n{\n  \"codes\": [\n    {\n      \"code\": \"GET /v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/inputs HTTP/1.1\\nHost: f4c-api.sbgenomics.com\\nX-SBG-Auth-Token: 3259c50e1ac5426ea8f1273259740f74\\n\",\n      \"language\": \"http\",\n      \"name\": null\n    },\n    {\n      \"code\": \"curl  -s -H \\\"X-SBG-Auth-Token: 6282d5e2121d43e7900e9d52b15845e7\\\" -H \\\"content-type: application/json\\\" -X GET \\\"https://f4c-api.sbgenomics.com/v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/inputs\\\"\",\n      \"language\": \"curl\",\n      \"name\": \"cURL\"\n    }\n  ],\n  \"sidebar\": true\n}\n[/block]\n###Header Fields\n[block:parameters]\n{\n  \"data\": {\n    \"h-0\": \"Name\",\n    \"h-1\": \"Description\",\n    \"0-0\": \"`X-SBG-Auth-Token`\\n_required_\",\n    \"0-1\": \"Your [authentication token](doc:get-your-authentication-token).\",\n    \"h-2\": \"\"\n  },\n  \"cols\": 2,\n  \"rows\": 1\n}\n[/block]\n###Path parameters\n[block:parameters]\n{\n  \"data\": {\n    \"0-0\": \"`task_id`\\n_required_\",\n    \"h-0\": \"Name\",\n    \"h-1\": \"Description\",\n    \"0-1\": \"The ID of the task you are querying\"\n  },\n  \"cols\": 2,\n  \"rows\": 1\n}\n[/block]\n###Query parameters\n[block:parameters]\n{\n  \"data\": {\n    \"h-0\": \"Name\",\n    \"h-1\": \"Data type\",\n    \"h-2\": \"Description\",\n    \"0-0\": \"`fields`\",\n    \"0-1\": \"string\",\n    \"0-2\": \"Selector specifying a subset of fields to include in the response.\"\n  },\n  \"cols\": 3,\n  \"rows\": 1\n}\n[/block]\n##Response\n\n[See a list of response codes that may be contained in the body of the response.](doc:api-status-codes) \n\n###Example response body\n[block:code]\n{\n  \"codes\": [\n    {\n      \"code\": \"{\\n    \\\"Known_SNPs\\\": [\\n        {\\n            \\\"class\\\": \\\"File\\\",\\n            \\\"path\\\": \\\"566b059ae4b0c560b469eb7c\\\",\\n            \\\"name\\\": \\\"dbsnp_137.b37.vcf\\\"\\n        }\\n    ],\\n    \\\"Known_Indels\\\": [\\n        {\\n            \\\"class\\\": \\\"File\\\",\\n            \\\"path\\\": \\\"566b059ae4b0c560b469eb81\\\",\\n            \\\"name\\\": \\\"1000G_phase1.indels.b37.vcf\\\"\\n        },\\n        {\\n            \\\"class\\\": \\\"File\\\",\\n            \\\"path\\\": \\\"566b059ae4b0c560b469eb86\\\",\\n            \\\"name\\\": \\\"Mills_and_1000G_gold_standard.indels.b37.sites.vcf\\\"\\n        }\\n    ],\\n    \\\"input_file\\\": {\\n        \\\"class\\\": \\\"File\\\",\\n        \\\"path\\\": \\\"56796c27e4b0c560b46ab03c\\\",\\n        \\\"name\\\": \\\"3d1b628fa0d554d5fefb71444511dcbb.bam\\\"\\n    },\\n    \\\"Target_BED\\\": {\\n        \\\"class\\\": \\\"File\\\",\\n        \\\"path\\\": \\\"566b059ae4b0c560b469eb7f\\\",\\n        \\\"name\\\": \\\"exome_targets.b37.bed\\\"\\n    },\\n    \\\"Reference\\\": {\\n        \\\"class\\\": \\\"File\\\",\\n        \\\"path\\\": \\\"56796f07e4b0c560b46ab043\\\",\\n        \\\"name\\\": \\\"GRCh37-lite.fa\\\"\\n    },\\n    \\\"snpEff_databse\\\": {\\n        \\\"class\\\": \\\"File\\\",\\n        \\\"path\\\": \\\"566b059ae4b0c560b469eb83\\\",\\n        \\\"name\\\": \\\"snpEff_v3_3_GRCh37.71.zip\\\"\\n    },\\n    \\\"memory_per_job\\\": 8000\\n}\",\n      \"language\": \"json\"\n    }\n  ],\n  \"sidebar\": true\n}\n[/block]","excerpt":"/tasks/{task_id}/inputs","slug":"get-task-inputs","type":"endpoint","title":"Get task inputs"}

getGet task inputs

/tasks/{task_id}/inputs

This call returns just the inputs provided to the specified task. The task is referred to by its ID, which you can obtain by making the call to [list all tasks you can access](doc:list-tasks-you-can-access). [block:code] { "codes": [ { "code": "https://f4c-api.sbgenomics.com/v2/tasks/{task_id}/inputs", "language": "text", "name": "Path" } ] } [/block] ##Request ###Example request [block:code] { "codes": [ { "code": "GET /v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/inputs HTTP/1.1\nHost: f4c-api.sbgenomics.com\nX-SBG-Auth-Token: 3259c50e1ac5426ea8f1273259740f74\n", "language": "http", "name": null }, { "code": "curl -s -H \"X-SBG-Auth-Token: 6282d5e2121d43e7900e9d52b15845e7\" -H \"content-type: application/json\" -X GET \"https://f4c-api.sbgenomics.com/v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/inputs\"", "language": "curl", "name": "cURL" } ], "sidebar": true } [/block] ###Header Fields [block:parameters] { "data": { "h-0": "Name", "h-1": "Description", "0-0": "`X-SBG-Auth-Token`\n_required_", "0-1": "Your [authentication token](doc:get-your-authentication-token).", "h-2": "" }, "cols": 2, "rows": 1 } [/block] ###Path parameters [block:parameters] { "data": { "0-0": "`task_id`\n_required_", "h-0": "Name", "h-1": "Description", "0-1": "The ID of the task you are querying" }, "cols": 2, "rows": 1 } [/block] ###Query parameters [block:parameters] { "data": { "h-0": "Name", "h-1": "Data type", "h-2": "Description", "0-0": "`fields`", "0-1": "string", "0-2": "Selector specifying a subset of fields to include in the response." }, "cols": 3, "rows": 1 } [/block] ##Response [See a list of response codes that may be contained in the body of the response.](doc:api-status-codes) ###Example response body [block:code] { "codes": [ { "code": "{\n \"Known_SNPs\": [\n {\n \"class\": \"File\",\n \"path\": \"566b059ae4b0c560b469eb7c\",\n \"name\": \"dbsnp_137.b37.vcf\"\n }\n ],\n \"Known_Indels\": [\n {\n \"class\": \"File\",\n \"path\": \"566b059ae4b0c560b469eb81\",\n \"name\": \"1000G_phase1.indels.b37.vcf\"\n },\n {\n \"class\": \"File\",\n \"path\": \"566b059ae4b0c560b469eb86\",\n \"name\": \"Mills_and_1000G_gold_standard.indels.b37.sites.vcf\"\n }\n ],\n \"input_file\": {\n \"class\": \"File\",\n \"path\": \"56796c27e4b0c560b46ab03c\",\n \"name\": \"3d1b628fa0d554d5fefb71444511dcbb.bam\"\n },\n \"Target_BED\": {\n \"class\": \"File\",\n \"path\": \"566b059ae4b0c560b469eb7f\",\n \"name\": \"exome_targets.b37.bed\"\n },\n \"Reference\": {\n \"class\": \"File\",\n \"path\": \"56796f07e4b0c560b46ab043\",\n \"name\": \"GRCh37-lite.fa\"\n },\n \"snpEff_databse\": {\n \"class\": \"File\",\n \"path\": \"566b059ae4b0c560b469eb83\",\n \"name\": \"snpEff_v3_3_GRCh37.71.zip\"\n },\n \"memory_per_job\": 8000\n}", "language": "json" } ], "sidebar": true } [/block]